Co-funded by
the European Union

Online MG Training registration

Metagenomics applied to surveillance of pathogens and antimicrobial resistance: registration open

EFFORT Partners under the lead of DTU are offering a training course on the use of metagenomics for AMR surveillance.

The training will consist of two components:

  • starting with an online course,
  • followed by a workshop.

The online material will become available for the workshop participants from February 19, 2018. The workshop will be held in Estonia on March 19-20, 2018 (just before the annual SVEPM meeting).

The content of the training will include theoretical background on DNA extraction and metagenomics sequencing, instruction on the use of freely available tools for metagenomics analysis, interpretation of metagenomics analysis results and demonstration of the potential of metagenomics for surveillance of pathogens and antimicrobial resistance.

The target group for the training are professionals working at veterinary services, food safety authorities and reference laboratories as well as universities and competent authorities responsible for and involved in AMR surveillance. Ideally, participants will have theoretical background in basic microbiology and general knowledge about microbial communities and bacterial genetics equivalent to a bachelor level.

Registration is free. It is strongly encouraged that participants of the workshop previously complete the online training as it provides the basis for the interactive component. More information on the workshop in Estonia, including accommodation booking details, will be available after the registration.

Please register no later than 10 February 2018


Privacy: We collect information such as email addresses, name and telephone numbers from those who contact us by submitting the form below. The information we collect is not distributed or sold to a 3rd party. It will only be used to communicate with you about EFFORT or the event you registered for. You may request an extract of the information we have stored in our database at any time, and you may also request to be removed from our database. The data will be stored until the end of the project.

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